BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007B10SP1|AL425648
(788 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1613 1557 0.0
>3x_Contig1613
Length = 13977
Score = 1557 bits (784), Expect = 0.0
Identities = 786/788 (99%)
Strand = Plus / Minus
Query: 1 gatcaagcttacgcaaaacaaactttgaatcaattgttggttgaattggatgggttttcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2302 gatcaagcttacgcaaaacaaactttgaatcaattgttggttgaattggatgggttttcc 2243
Query: 61 caaacaagcggtataattatcatcggtgccactaacttcccagaatcattggataaggct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2242 caaacaagcggtataattatcatcggtgccactaacttcccagaatcattggataaggct 2183
Query: 121 ttgacaagaccaggtagattcgataaggtcgtcaatgttgacttacctgatgttcgcggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2182 ttgacaagaccaggtagattcgataaggtcgtcaatgttgacttacctgatgttcgcggg 2123
Query: 181 cgtgctgacattttgagacatcatatgaagaaggttactgttgctcctgatgtggaccca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2122 cgtgctgacattttgagacatcatatgaagaaggttactgttgctcctgatgtggaccca 2063
Query: 241 actatcattgcaagaggaaccccaggtctttctggtgctgagttgatgaatttagttaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2062 actatcattgcaagaggaaccccaggtctttctggtgctgagttgatgaatttagttaac 2003
Query: 301 caagccgccgtatacgcttgtyagaaaaatgctattgctgtcgatatgcagcactttgaa 360
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 2002 caagccgccgtatacgcttgtcagaaaaatgctattgctgtcgatatgcagcactttgaa 1943
Query: 361 tgggcaaaggataaaatcttgatgggtgctgaaaggaaaactatggttctcactgaagct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1942 tgggcaaaggataaaatcttgatgggtgctgaaaggaaaactatggttctcactgaagct 1883
Query: 421 actaaaagagccaccgcttatcatgaagccgggcatgcattgatggcactgtacactgcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1882 actaaaagagccaccgcttatcatgaagccgggcatgcattgatggcactgtacactgcc 1823
Query: 481 ggggcaacgccattatacaaagcaactatcttgccaagaggcagggcattaggtatcact 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1822 ggggcaacgccattatacaaagcaactatcttgccaagaggcagggcattaggtatcact 1763
Query: 541 ttccaacttcctgaaatggataaggtggacatcactaagaaagaatgtctagctaggtta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1762 ttccaacttcctgaaatggataaggtggacatcactaagaaagaatgtctagctaggtta 1703
Query: 601 gatgtgtgcatgggtggtaagattgcagaagaactgatttatggtaaggaaaatactacc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1702 gatgtgtgcatgggtggtaagattgcagaagaactgatttatggtaaggaaaatactacc 1643
Query: 661 agtggttgtggttcggatttacaaaatgctaccaacactgctagagcaatggttactcag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1642 agtggttgtggttcggatttacaaaatgctaccaacactgctagagcaatggttactcag 1583
Query: 721 tacggtatgagtkaacaagtcggaccagtaaatttggctgataagtgggactcatggtct 780
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1582 tacggtatgagtgaacaagtcggaccagtaaatttggctgataagtgggactcatggtct 1523
Query: 781 ggaaaaat 788
||||||||
Sbjct: 1522 ggaaaaat 1515
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4933
Number of Sequences: 1807
Number of extensions: 4933
Number of successful extensions: 28
Number of sequences better than 1.0e-20: 1
length of query: 788
length of database: 10,358,551
effective HSP length: 16
effective length of query: 772
effective length of database: 10,329,639
effective search space: 7974481308
effective search space used: 7974481308
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)